Operation not permitted

ls: cannot open directory '.': Operation not permitted

System Preferences

Security & Privacy -> Files and Folders
                   -> Full Disk Access      

rm -rf /Users/your-user/Library/Containers/*
rm: com.apple.CloudDocs.MobileDocumentsFileProvider: Operation not permitted
rm: com.apple.Notes: Operation not permitted
rm: com.apple.Safari: Operation not permitted
rm: com.apple.corerecents.recentsd/Data/Library/Recents: Operation not permitted
rm: com.apple.corerecents.recentsd/Data/Library: Operation not permitted
rm: com.apple.corerecents.recentsd/Data: Operation not permitted
rm: com.apple.corerecents.recentsd: Operation not permitted
rm: com.apple.mail: Operation not permitted
rm: com.apple.news: Operation not permitted
rm: com.apple.stocks: Operation not permitted 

~/Library/Caches/*
~/Library/Containers/*

See also

• dtruss
• System Integrity Protection (SIP), Operation not permitted